Analysis

Assembled genome/contig sequence (multi-fasta)
File path :

NGS sequence (short read, gzipped fastq)
Forward sequnce :
Reverse sequence (optional) :

emm typing
MLST
Phylogenetic Analysis
  emm type (ex. 1.0,2.0):  
      Pick only one strain from each emm.
  isolated year : -
  regions (ex. tokyo,osaka):  
  STSS/non-STSS : both   STSS only   non-STSS only  
  Minimum distance between SNPs :
  Minimum distance to end of sequence :
Virulence factors